checkCIF/PLATON report (basic structural check)

No syntax errors found.                               CIF dictionary
Please wait while processing .... Interpreting this report
Datablock: 04src0194
Bond precision: C-C = 0.0134 A Wavelength=0.71073
Cell: a=25.809(5) b=11.899(5) c=17.357(5)
alpha=90 beta=90 gamma=90
Temperature: 120 K
Calculated Reported
Volume 5330(3) 5330(3)
Space group P n a 21 Pna2(1)
Hall group P 2c -2n P 2c -2n
Moiety formula C44 H36 N16 Ni2, 4(Cl O4), 5(O) ?
Sum formula C44 H36 Cl4 N16 Ni2 O21 C44 H46 CL4 N16 NI2 O21
Mr 1384.07 1394.19
Dx,g cm-3 1.725 1.737
Z 4 4
Mu (mm-1) 1.004 1.004
F000 2816.0 2856.0
F000' 2822.34
h,k,lmax 33,15,22 33,15,22
Nref 6327[ 12247] 12190
Tmin,Tmax 0.845,0.970 0.809,0.970
Tmin' 0.802
Correction method= MULTI-SCAN
Data completeness= 1.93/1.00 Theta(max)= 27.480
R(reflections)= 0.0810( 8263) wR2(reflections)= 0.1905( 12190)
S = 1.069 Npar= 786

The following ALERTS were generated. Each ALERT has the format
       test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.

Alert level A PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O51 PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O52 PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O53 PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O54 PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O55
Alert level B PLAT111_ALERT_2_B ADDSYM Detects (Pseudo) Centre of Symmetry ..... 94 PerFi PLAT112_ALERT_2_B ADDSYM Detects Additional (Pseudo) Symm. Elem... a PLAT430_ALERT_2_B Short Inter D...A Contact O22 .. O53 .. 2.83 Ang. PLAT430_ALERT_2_B Short Inter D...A Contact O51 .. O55 .. 2.72 Ang. PLAT430_ALERT_2_B Short Inter D...A Contact O52 .. O53 .. 2.64 Ang. PLAT430_ALERT_2_B Short Inter D...A Contact O52 .. O54 .. 2.79 Ang.
Alert level C RINTA01_ALERT_3_C The value of Rint is greater than 0.12 Rint given 0.126 STRVA01_ALERT_4_C Flack test results are ambiguous. From the CIF: _refine_ls_abs_structure_Flack 0.520 From the CIF: _refine_ls_abs_structure_Flack_su 0.030 PLAT020_ALERT_3_C The value of Rint is greater than 0.12 ......... 0.13 PLAT213_ALERT_2_C Atom N38 has ADP max/min Ratio ..... 3.80 prola PLAT213_ALERT_2_C Atom C5 has ADP max/min Ratio ..... 3.60 oblat PLAT213_ALERT_2_C Atom C7 has ADP max/min Ratio ..... 3.90 oblat PLAT213_ALERT_2_C Atom C32 has ADP max/min Ratio ..... 3.30 prola PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang .. 13 PLAT430_ALERT_2_C Short Inter D...A Contact O11 .. O55 .. 2.88 Ang. PLAT430_ALERT_2_C Short Inter D...A Contact O33 .. O53 .. 2.88 Ang. PLAT041_ALERT_1_C Calc. and Reported SumFormula Strings Differ ? PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ? PLAT153_ALERT_1_C The su's on the Cell Axes are Equal (x 100000) 500 Ang. PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl21 PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl31 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3 Cl O4 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 4 Cl O4 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 5 Cl O4 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 9 O
Alert level G FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the _chemical_formula_sum and the formula from the _atom_site* data. Atom count from _chemical_formula_sum:C44 H46 Cl4 N16 Ni2 O21 Atom count from the _atom_site data: C44 H36 Cl4 N16 Ni2 O21 CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected. CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional? From the CIF: _cell_formula_units_Z 4 From the CIF: _chemical_formula_sum C44 H46 Cl4 N16 Ni2 O21 TEST: Compare cell contents of formula and atom_site data atom Z*formula cif sites diff C 176.00 176.00 0.00 H 184.00 144.00 40.00 Cl 16.00 16.00 0.00 N 64.00 64.00 0.00 Ni 8.00 8.00 0.00 O 84.00 84.00 0.00 REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.48 From the CIF: _reflns_number_total 12190 Count of symmetry unique reflns 6327 Completeness (_total/calc) 192.67% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 5863 Fraction of Friedel pairs measured 0.927 Are heavy atom types Z>Si present yes PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large. 30.22 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 823 PLAT033_ALERT_4_G Flack x Parameter Value Deviates from Zero ..... 0.52
5 ALERT level A = In general: serious problem 6 ALERT level B = Potentially serious problem 19 ALERT level C = Check and explain 7 ALERT level G = General alerts; check 5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 19 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 9 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Publication of your CIF in IUCr journals

A basic structural check has been run on your CIF. These basic checks will be run on all CIFs submitted for publication in IUCr journals (Acta Crystallographica, Journal of Applied Crystallography, Journal of Synchrotron Radiation); however, if you intend to submit to Acta Crystallographica Section C or E, you should make sure that full publication checks are run on the final version of your CIF prior to submission.

Publication of your CIF in other journals

Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.


PLATON version of 13/08/2009; check.def file version of 12/08/2009
Datablock 04src0194 - ellipsoid plot

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