checkCIF/PLATON report (basic structural check)
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Datablock: s93
Bond precision: |
C-C = 0.0070 A |
Wavelength=0.71073 |
Cell: |
a=24.1190(6) |
b=21.7004(3) |
c=21.8150(4) |
|
alpha=90 |
beta=90 |
gamma=90 |
Temperature: |
120 K |
|
|
|
Calculated |
Reported |
Volume |
11417.8(4)
|
11417.8(4) |
Space group |
I b a 2 |
Iba2 |
Hall group |
I 2 -2c |
I 2 -2c |
Moiety formula |
2(C24 H48 Fe2 N18), C4 H8 O2, 8(C F3 O3 S), C2 H5 O, 5(O)
|
?
|
Sum formula |
C62 H109 F24 Fe4 N36 O32 S8
|
C31 H60 F12 FE2 N18 O16 S4
|
Mr |
2806.81 |
1408.91
|
Dx,g cm-3 |
1.633 |
1.639
|
Z |
4 |
8
|
Mu (mm-1) |
0.770 |
0.770
|
F000 |
5748.0 |
5792.0 |
F000' |
5760.96
|
|
h,k,lmax |
31,28,28 |
31,28,28 |
Nref |
6733[ 13105] |
12808 |
Tmin,Tmax |
0.895,0.977 |
0.813,0.977 |
Tmin' |
0.806 |
|
Correction method= MULTI-SCAN |
|
Data completeness= 1.90/0.98 |
Theta(max)= 27.480 |
R(reflections)= 0.0606( 9603) |
wR2(reflections)= 0.1662( 12808) |
The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level A
PLAT413_ALERT_2_A Short Inter XH3 .. XHn H8A .. H21H .. 1.89 Ang.
PLAT415_ALERT_2_A Short Inter D-H..H-X H11E .. H12A .. 1.78 Ang.
PLAT415_ALERT_2_A Short Inter D-H..H-X H12C .. H16A .. 1.72 Ang.
PLAT430_ALERT_2_A Short Inter D...A Contact O120 .. O130 .. 2.29 Ang.
PLAT432_ALERT_2_A Short Inter X...Y Contact O130 .. C121 .. 2.26 Ang.
Alert level B
PLAT413_ALERT_2_B Short Inter XH3 .. XHn H12C .. H18A .. 2.07 Ang.
PLAT415_ALERT_2_B Short Inter D-H..H-X H12B .. H16A .. 2.00 Ang.
PLAT432_ALERT_2_B Short Inter X...Y Contact F39 .. C112 .. 2.68 Ang.
PLAT432_ALERT_2_B Short Inter X...Y Contact N16 .. C120 .. 2.92 Ang.
Alert level C
STRVA01_ALERT_4_C Flack test results are ambiguous.
From the CIF: _refine_ls_abs_structure_Flack 0.470
From the CIF: _refine_ls_abs_structure_Flack_su 0.020
PLAT216_ALERT_3_C Disordered O120 (An/Solv) ADP max/min Ratio 5.10
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.37
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.02
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.33
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.33
PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O120
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... >O101
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... >O141
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... <O102
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... <O140
PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang .. 7
PLAT420_ALERT_2_C D-H Without Acceptor N16 - H16A ... ?
PLAT432_ALERT_2_C Short Inter X...Y Contact O31 .. C212 .. 2.98 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact N11 .. C120 .. 3.03 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C26 .. O50 .. 2.98 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C27 .. O50 .. 2.95 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C111 .. O140 .. 2.93 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C211 .. O140 .. 2.94 Ang.
PLAT041_ALERT_1_C Calc. and Reported SumFormula Strings Differ ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.50 Ratio
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ?
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of O111
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of O112
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C112
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C212
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of S34
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C34
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of S37
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of S40
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C40
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C121
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of S50
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of C50
Alert level G
FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and the formula from the _atom_site* data.
Atom count from _chemical_formula_sum:C31 H60 F12 Fe2 N18 O16 S4
Atom count from the _atom_site data: C31 H54.5 F12 Fe2 N18 O16 S4
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional?
From the CIF: _cell_formula_units_Z 8
From the CIF: _chemical_formula_sum C31 H60 F12 Fe2 N18 O16 S4
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 248.00 248.00 0.00
H 480.00 436.00 44.00
F 96.00 96.00 0.00
Fe 16.00 16.00 0.00
N 144.00 144.00 0.00
O 128.00 128.00 0.00
S 32.00 32.00 0.00
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 27.48
From the CIF: _reflns_number_total 12808
Count of symmetry unique reflns 6733
Completeness (_total/calc) 190.23%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 6075
Fraction of Friedel pairs measured 0.902
Are heavy atom types Z>Si present yes
PLAT072_ALERT_2_G SHELXL First Parameter in WGHT Unusually Large.. 0.10
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large. 7.86
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 242
PLAT033_ALERT_4_G Flack x Parameter Value Deviates from Zero ..... 0.47
PLAT302_ALERT_4_G Note: Anion/Solvent Disorder ................... 29.00 Perc.
PLAT811_ALERT_5_G No ADDSYM Analysis: Too Many Excluded Atoms .... !
5 ALERT level A = In general: serious problem
4 ALERT level B = Potentially serious problem
34 ALERT level C = Check and explain
10 ALERT level G = General alerts; check
5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
28 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
16 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Publication of your CIF in IUCr journals
A basic structural check has been run on your CIF.
These basic checks will be run on all CIFs submitted for publication in
IUCr journals (Acta Crystallographica, Journal of Applied Crystallography,
Journal of Synchrotron Radiation); however, if you intend to submit to Acta
Crystallographica Section C or E, you should make sure that
full publication
checks are run on the final version of your CIF prior to submission.
Publication of your CIF in other journals
Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.
PLATON version of 13/08/2009; check.def file version of 12/08/2009
Datablock s93 - ellipsoid plot |
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