checkCIF/PLATON report (basic structural check)
No syntax errors found. CIF dictionary
Please wait while processing .... Interpreting this report
Datablock: 04mbh0601
Bond precision: |
C-C = 0.0039 A |
Wavelength=0.71073 |
Cell: |
a=7.393(1) |
b=8.215(4) |
c=23.323(16) |
|
alpha=90.87(3) |
beta=98.16(2) |
gamma=99.94(3) |
Temperature: |
120 K |
|
|
|
Calculated |
Reported |
Volume |
1380.0(12) |
1380.0(12) |
Space group |
P -1 |
P-1 |
Hall group |
-P 1 |
? |
Moiety formula |
2(C7 H16 N), 2(C4 H5 O6), H2 O, O
|
?
|
Sum formula |
C22 H44 N2 O14
|
C11 H23 N O7
|
Mr |
560.59 |
281.30
|
Dx,g cm-3 |
1.349 |
1.354
|
Z |
2 |
4
|
Mu (mm-1) |
0.112 |
0.112
|
F000 |
604.0 |
608.0 |
F000' |
604.39
|
|
h,k,lmax |
9,10,30 |
9,10,30 |
Nref |
6329 |
6189 |
Tmin,Tmax |
0.978,0.993 |
0.978,0.993 |
Tmin' |
0.978 |
|
Correction method= AbsCorr=MULTI-SCAN
|
|
Data completeness= Ratio = 0.978 |
Theta(max)= 27.480 |
R(reflections)= 0.0588( 3715) |
wR2(reflections)= 0.1525( 6189) |
The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level A
PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O1W
Alert level B
PLAT430_ALERT_2_B Short Inter D...A Contact O1A .. O1W .. 2.83 Ang.
PLAT430_ALERT_2_B Short Inter D...A Contact O1W .. O1W .. 2.80 Ang.
Alert level C
DIFMX01_ALERT_2_C The maximum difference density is > 0.1*ZMAX*0.75
_refine_diff_density_max given = 0.688
Test value = 0.600
DIFMX02_ALERT_1_C The maximum difference density is > 0.1*ZMAX*0.75
The relevant atom site should be identified.
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.98
PLAT097_ALERT_2_C Maximum (Positive) Residual Density ............ 0.69 e/A**
PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.60 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for O2 -- C2 .. 5.33 su
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.13
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.50 Ratio
PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ?
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
C4 H5 O6
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 6
O
Alert level G
FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and the formula from the _atom_site* data.
Atom count from _chemical_formula_sum:C11 H23 N1 O7
Atom count from the _atom_site data: C11 H22 N1 O7
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional?
From the CIF: _cell_formula_units_Z 4
From the CIF: _chemical_formula_sum C11 H23 N O7
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 44.00 44.00 0.00
H 92.00 88.00 4.00
N 4.00 4.00 0.00
O 28.00 28.00 0.00
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3
PLAT793_ALERT_4_G Check the Absolute Configuration of C2 ..... S
PLAT793_ALERT_4_G Check the Absolute Configuration of C3 ..... S
PLAT793_ALERT_4_G Check the Absolute Configuration of C32 ..... S
PLAT793_ALERT_4_G Check the Absolute Configuration of C33 ..... S
1 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
13 ALERT level C = Check and explain
8 ALERT level G = General alerts; check
7 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
8 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Publication of your CIF in IUCr journals
A basic structural check has been run on your CIF.
These basic checks will be run on all CIFs submitted for publication in
IUCr journals (Acta Crystallographica, Journal of Applied Crystallography,
Journal of Synchrotron Radiation); however, if you intend to submit to Acta
Crystallographica Section C or E, you should make sure that
full publication
checks are run on the final version of your CIF prior to submission.
Publication of your CIF in other journals
Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.
PLATON version of 29/04/2008; check.def file version of 22/04/2008
Datablock 04mbh0601 - ellipsoid plot |
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