EPSRC National Crystallography Service
Data Collection Summary kccd2 (damien)


Summary report for Directory: diska/06skc0005

Report generated Feb 23, 2006; 14:24:26

Unit cell

2981 reflections with 0.41°<theta<27.48° (resolution between 50.00A and 0.77A) were used for unit cell refinement

Symmetry used
in scalepack
p1
a (Angstrom)7.3681 +/- 0.0004
b (Angstrom)9.0495 +/- 0.0003
c (Angstrom)10.7488 +/- 0.0005
alpha (°)76.548 +/- 0.003
beta (°)80.395 +/- 0.002
gamma (°)76.931 +/- 0.003
Volume (A**3)674.03 +/- 0.05
Mosaicity (°)0.558 +/- 0.003

Data collection

Summary

Total number of images collected337
Total exposure time5.6 hours
Data collection exposure time5.5 hours
Data collection wall-clock time5.9 hours

Experimental Conditions

Wavelength0.71073 A
Crystal to detector distance31.00 mm

Scans

TypeName# imagesTotal
Rotation
Per frame
Rotation
Exposure
per frame
Used in
scaling
data collections01f181362.0° phi2.000°60 secondsYes
data collections02f16 32.0° omega2.000°60 secondsYes
data collections03f55110.0° omega2.000°60 secondsYes
data collections04f23 46.0° omega2.000°60 secondsYes
data collections05f54108.0° omega2.000°60 secondsYes
Phi/Chii01f - i08f830 seconds

Scalepack Scaling

Deleted observations

Rejected 304
Zero sigma or profile test   5
Overload or incomplete profile 544
Sigma cutoff  24
High resolution limit 855

Final Data Set

Scale factor range6.80-10.55
Number of 'full' reflections  9018
Number of 'partial' reflections  6254
Total number of integrated reflections 14617
Total number of unique reflections  3036
Data completeness  99.9%
Resolution range50.00-0.77 A
Theta range0.41°-27.48°
Average Intensity   53.9
Average Sigma(I)    2.4
Overall R-merge (linear)  0.087

Sadabs Results

Parameter refinement on 8413 reflections reduced R(int) from 0.1711 to 0.0588

Before rejection, 15313 reflections total and 3341 unique

After rejection, 14759 reflections total and 3334 unique

Runs

  Run 2-theta  R(int)  Incid. factors  Diffr. factors    K     Total I>2sig(I)
    1    8.3  0.0786   0.806 - 1.752   0.902 - 1.202   1.423    8169    4719
    2   -7.8  0.0657   0.443 - 0.491   0.942 - 1.143   1.334     641     421
    3   -7.8  0.0694   0.458 - 0.619   0.942 - 1.074   1.363    2514    1586
    4   -7.8  0.0814   1.351 - 1.617   0.942 - 1.192   1.477     978     528
    5   -7.8  0.0774   0.637 - 0.769   0.900 - 1.192   1.355    2457    1472
Ratio of minimum to maximum apparent transmission: 0.748897

Metadata

  Group    Mike Hursthouse  
  Operator   Sam Callear  
  Sample Owner     
  Local Code   wp5 b6  
  Formula   C12H20O4N2  
  Crystal Colour    Colourless  
  Crystal Habit    Fragment  
  Crystal Size   0.09 x 0.07 x 0.02 (mm3) 
  Temperature   120(K) 
  Generator   50 (kV)   85 (mA) 
  Primary Solvent     
  Other Solvents     

File Explanations

SampleCode.zip
      SampleCode.hkl - data corrected using  SADABS
      SampleCode_merge_none.hkl - equivalents and friedels kept separate  (See "Final Data Set" table in this report)
      SampleCode.p4p - skeleton p4p file for use with XPREP
      SampleCode.htm - this summary file


Southampton CIF entry fields

_exptl_absorpt_process_details       'SADABS V2.10 (Sheldrick, G.M., 2003)'

_diffrn_ambient_temperature           120(2)
_diffrn_radiation_wavelength           0.71073
_diffrn_radiation_type                      MoK\a
_diffrn_radiation_source                  'Bruker-Nonius FR591 rotating anode'
_diffrn_radiation_monochromator    '10cm confocal mirrors'
_diffrn_measurement_device_type  'Bruker-Nonius 95mm CCD camera on \k-goniostat'
_diffrn_measurement_method          '\f & \w scans'
_diffrn_detector_area_resol_mean   9.091

_computing_data_collection        
'COLLECT (Hooft, R.W.W., 1998)'
_computing_cell_refinement        
'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)'
#Although determined using DirAx, the cell is refined in the HKL
#package during data reduction
_computing_data_reduction         
'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' 

Software References

Unit Cell Determination using DirAx:
Duisenberg AJM. Indexing in Single-Crystal Diffractometry with an Obstinate List of Reflections. Journal of Applied Crystallography 1992; 25: 92-96.
Duisenberg AJM, Hooft RWW, Schreurs AMM, Kroon J. Accurate cells from area-detector images. Journal of Applied Crystallography 2000; 33: 893-898.

Diffractometer control and strategy calculation using COLLECT:
Hooft RWW. COLLECT data collection software, Nonius B.V., 1998.

Standard Data Reduction using HKL(Denzo & Scalepack):
Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Macromolecular Crystallography, Pt A. 1997; 276: 307-326.

Absorption Correction
Sheldrick, G. M. (2003). SADABS. Version 2.10. Bruker AXS Inc., Madison, Wisconsin, USA.

Non-Standard Data Reduction using EvalCCD:
Duisenberg AJM, Kroon-Batenburg LMJ, Schreurs AMM. An intensity evaluation method: EVAL-14. Journal of Applied Crystallography 2003; 36: 220-229.

For more information visit the service web site at: http://www.soton.ac.uk/~xservice/