checkCIF/PLATON report (basic structural check)

No syntax errors found.                               CIF dictionary
Please wait while processing .... Interpreting this report
Datablock: 2008src0009
Bond precision: C-C = 0.0056 A Wavelength=0.71073
Cell: a=18.3051(5) b=8.1390(1) c=39.2691(9)
alpha=90 beta=101.662(1) gamma=90
Temperature: 120 K
Calculated Reported
Volume 5729.7(2) 5729.7(2)
Space group P 21/n P2(1)n
Hall group -P 2yn ?
Moiety formula C5 H13 Cl3 N5 O P3 ?
Sum formula C5 H13 Cl3 N5 O P3 C5 H13 Cl3 N5 O P3
Mr 358.46 358.46
Dx,g cm-3 1.662 1.662
Z 16 16
Mu (mm-1) 0.966 0.966
F000 2912.0 2912.0
F000' 2924.46
h,k,lmax 23,10,51 23,10,50
Nref 13163 11550
Tmin,Tmax 0.793,0.953 0.774,0.953
Tmin' 0.763
Correction method= AbsCorr=MULTI-SCAN
Data completeness= Ratio = 0.877 Theta(max)= 27.500
R(reflections)= 0.0542( 7530) wR2(reflections)= 0.1337( 11550)
S = 1.076 Npar= 649

The following ALERTS were generated. Each ALERT has the format
       test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.

Alert level A SYMMG01_ALERT_1_A Unrecognised _symmetry_space_group_name_H-M International Tables space group number is not in the CIF From the CIF: _symmetry_space_group_name_H-M P2(1)n Int. Tables space group number for P2(1)n is 0 SYMMG02_ALERT_1_A Supplied _symmetry_space_group_name_H-M not recognised From the CIF: _symmetry_equiv_pos_as_xyz x, y, z -x+1/2, y+1/2, -z+1/2 -x, -y, -z x-1/2, -y-1/2, z-1/2 These symops generate the Hall space group symbol -p_2yn which is equivalent to the H-M space group symbol p_21/n PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full Low ....... 0.88 PLAT222_ALERT_3_A Large Non-Solvent H Ueq(max)/Ueq(min) ... 6.12 Ratio PLAT222_ALERT_3_A Large Non-Solvent H Ueq(max)/Ueq(min) ... 10.00 Ratio PLAT129_ALERT_4_A Unusual Space-group Specified .................. P21N
Alert level B REFLT03_ALERT_3_B Reflection count < 90% complete (theta max?) From the CIF: _diffrn_reflns_theta_max 27.50 From the CIF: _diffrn_reflns_theta_full 27.50 From the CIF: _reflns_number_total 11550 TEST2: Reflns within _diffrn_reflns_theta_max Count of symmetry unique reflns 13163 Completeness (_total/calc) 87.75% PLAT022_ALERT_3_B Ratio Unique / Expected Reflections too Low .... 0.88
Alert level C PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.10 Ratio PLAT245_ALERT_2_C U(iso) H14N Smaller than U(eq) N14 by ... 0.02 AngSq PLAT245_ALERT_2_C U(iso) H19N Smaller than U(eq) N19 by ... 0.02 AngSq PLAT245_ALERT_2_C U(iso) H20N Smaller than U(eq) N20 by ... 0.01 AngSq PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 6 PLAT352_ALERT_3_C Short N-H Bond (0.87A) N4 - H4N ... 0.76 Ang. PLAT352_ALERT_3_C Short N-H Bond (0.87A) N5 - H5N ... 0.76 Ang. PLAT352_ALERT_3_C Short N-H Bond (0.87A) N10 - H10N ... 0.73 Ang. PLAT352_ALERT_3_C Short N-H Bond (0.87A) N20 - H20N ... 0.76 Ang. PLAT420_ALERT_2_C D-H Without Acceptor N4 - H4N ... ? PLAT420_ALERT_2_C D-H Without Acceptor N14 - H14N ... ? PLAT120_ALERT_1_C Reported SPGR P21n Inconsistent with Explicit P21/n PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 4 C5 H13 Cl3 N5 O P3
Alert level G PLAT793_ALERT_4_G Check the Absolute Configuration of P1 ..... S PLAT793_ALERT_4_G Check the Absolute Configuration of P2 ..... R PLAT793_ALERT_4_G Check the Absolute Configuration of P4 ..... R PLAT793_ALERT_4_G Check the Absolute Configuration of P5 ..... S PLAT793_ALERT_4_G Check the Absolute Configuration of P7 ..... R PLAT793_ALERT_4_G Check the Absolute Configuration of P8 ..... S PLAT793_ALERT_4_G Check the Absolute Configuration of P10 ..... S PLAT793_ALERT_4_G Check the Absolute Configuration of P11 ..... R
6 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 13 ALERT level C = Check and explain 8 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 5 ALERT type 2 Indicator that the structure model may be wrong or deficient 11 ALERT type 3 Indicator that the structure quality may be low 10 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Publication of your CIF in IUCr journals

A basic structural check has been run on your CIF. These basic checks will be run on all CIFs submitted for publication in IUCr journals (Acta Crystallographica, Journal of Applied Crystallography, Journal of Synchrotron Radiation); however, if you intend to submit to Acta Crystallographica Section C or E, you should make sure that full publication checks are run on the final version of your CIF prior to submission.

Publication of your CIF in other journals

Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.


PLATON version of 29/04/2008; check.def file version of 22/04/2008
Datablock 2008src0009 - ellipsoid plot

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