EPSRC National Crystallography Service
Data Collection Summary kccd2 (damien)


Summary report for Directory: home/diska/2008src0131

Report generated Feb 26, 2008; 18:20:43

Unit cell

11819 reflections with 2.91°<theta<27.48° (resolution between 7.00A and 0.77A) were used for unit cell refinement

Symmetry used
in scalepack
p2
a (Angstrom)7.9919 +/- 0.0004
b (Angstrom)9.1538 +/- 0.0005
c (Angstrom)17.7888 +/- 0.0007
alpha (°) 90.000
beta (°)98.160 +/- 0.003
gamma (°) 90.000
Volume (A**3)1288.19 +/- 0.11
Mosaicity (°)0.643 +/- 0.003

Data collection

Summary

Total number of images collected182
Total exposure time118.3 minutes
Data collection exposure time116.9 minutes
Data collection wall-clock time124.3 minutes

Experimental Conditions

Wavelength0.71073 A
Crystal to detector distance30.00 mm

Scans

TypeName# imagesTotal
Rotation
Per frame
Rotation
Exposure
per frame
Used in
scaling
data collections01f51102.0° omega2.000°40 secondsYes
data collections02f51102.0° omega2.000°40 secondsYes
data collections03f48 96.0° omega2.000°40 secondsYes
data collections04f24 48.0° omega2.000°40 secondsYes
Phi/Chii01f - i08f810 seconds

Scalepack Scaling

Deleted observations

Rejected   3
Zero sigma or profile test   2
Overload or incomplete profile 494
Sigma cutoff 254
High resolution limit  10

Final Data Set

Scale factor10.00
Number of 'full' reflections  8195
Number of 'partial' reflections  7026
Total number of integrated reflections 14130
Total number of unique reflections  3120
Data completeness  99.6%
Resolution range7.00-0.77 A
Theta range2.91°-27.48°
Average Intensity   35.3
Average Sigma(I)    1.5
Overall R-merge (linear)  0.226

Sadabs Results

Parameter refinement on 9492 reflections reduced R(int) from 0.1682 to 0.0776

Before rejection, 13983 reflections total and 3135 unique

After rejection, 11993 reflections total and 3113 unique

Runs

  Run 2-theta  R(int)  Incid. factors  Diffr. factors    K     Total I>2sig(I)
    1    5.2  0.1083   0.928 - 1.627   0.975 - 1.331   2.132    3562    2177
    2   10.3  0.0821   0.851 - 1.383   0.982 - 1.222   1.997    3539    2405
    3   10.2  0.0783   0.604 - 0.855   0.985 - 1.262   1.909    3345    2391
    4   10.2  0.0878   0.359 - 0.428   0.982 - 1.152   2.020    1547    1033
Ratio of minimum to maximum apparent transmission: 0.732052

Metadata

  Group    Service  
  Operator   Simon Coles  
  Sample Owner   Skabara  
  Local Code   FV3ThBTX  
  Formula   C28H32N2S4  
  Crystal Colour    Yellow  
  Crystal Habit    Blade  
  Crystal Size   0.25 x 0.04 x 0.01 (mm3) 
  Temperature   120(K) 
  Generator   50 (kV)   85 (mA) 
  Primary Solvent     
  Other Solvents     

File Explanations

SampleCode.zip
      SampleCode.hkl - data corrected using  SADABS
      SampleCode_merge_none.hkl - equivalents and friedels kept separate  (See "Final Data Set" table in this report)
      SampleCode.p4p - skeleton p4p file for use with XPREP
      SampleCode.htm - this summary file


Southampton CIF entry fields

_exptl_absorpt_process_details       'SADABS 2007/2 (Sheldrick, G.M., 2007)'

_diffrn_ambient_temperature           120(2)
_diffrn_radiation_wavelength           0.71073
_diffrn_radiation_type                      MoK\a
_diffrn_radiation_source                  'Bruker-Nonius FR591 rotating anode'
_diffrn_radiation_monochromator    '10cm confocal mirrors'
_diffrn_measurement_device_type   'Bruker-Nonius APEX II CCD camera on \k-goniostat'
_diffrn_measurement_method          '\f & \w scans'
_diffrn_detector_area_resol_mean   '4096x4096pixels / 62x62mm'

_computing_data_collection        
'COLLECT (Hooft, R.W.W., 1998)'
_computing_cell_refinement        
'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)'
#Although determined using DirAx, the cell is refined in the HKL
#package during data reduction
_computing_data_reduction         
'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' 

Software References

Unit Cell Determination using DirAx:
Duisenberg AJM. Indexing in Single-Crystal Diffractometry with an Obstinate List of Reflections. Journal of Applied Crystallography 1992; 25: 92-96.
Duisenberg AJM, Hooft RWW, Schreurs AMM, Kroon J. Accurate cells from area-detector images. Journal of Applied Crystallography 2000; 33: 893-898.

Diffractometer control and strategy calculation using COLLECT:
Hooft RWW. COLLECT data collection software, Nonius B.V., 1998.

Standard Data Reduction using HKL(Denzo & Scalepack):
Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Macromolecular Crystallography, Pt A. 1997; 276: 307-326.

Absorption Correction
Sheldrick, G. M. (2007). SADABS. Version 2007/2. Bruker AXS Inc., Madison, Wisconsin, USA.

Non-Standard Data Reduction using EvalCCD:
Duisenberg AJM, Kroon-Batenburg LMJ, Schreurs AMM. An intensity evaluation method: EVAL-14. Journal of Applied Crystallography 2003; 36: 220-229.

For more information visit the service web site at: http://www.soton.ac.uk/~xservice/