checkCIF/PLATON report (basic structural check)
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Datablock: s93
Bond precision: |
C-C = 0.0065 A |
Wavelength=0.71073 |
Cell: |
a=25.134(6) |
b=25.332(9) |
c=20.455(9) |
|
alpha=90 |
beta=111.540(14) |
gamma=90 |
Temperature: |
120 K |
|
|
|
Calculated |
Reported |
Volume |
12114(8)
|
12114(7) |
Space group |
P 21/c |
P2(1)/c |
Hall group |
-P 2ybc |
-P 2ybc |
Moiety formula |
C72 H64 Mn4 N36, 9(C H3 N O2), 8(Cl O4), 2(H2 O), O
|
C72 H64 Mn4 N36, 9(C H3 N O2), 8(Cl O4), 3(H2 O)
|
Sum formula |
C81 H95 Cl8 Mn4 N45 O53
|
C81 H97 CL8 MN4 N45 O53
|
Mr |
3050.38 |
3052.40
|
Dx,g cm-3 |
1.673 |
1.674
|
Z |
4 |
4
|
Mu (mm-1) |
0.697 |
0.697
|
F000 |
6224.0 |
6232.0 |
F000' |
6237.10
|
|
h,k,lmax |
32,32,26 |
32,32,26 |
Nref |
27764 |
27697 |
Tmin,Tmax |
0.882,0.946 |
0.885,0.946 |
Tmin' |
0.882 |
|
Correction method= MULTI-SCAN |
|
Data completeness= 0.998 |
Theta(max)= 27.480 |
R(reflections)= 0.0733( 20658) |
wR2(reflections)= 0.1579( 27697) |
The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level A
PLAT430_ALERT_2_A Short Inter D...A Contact O53 .. O241 .. 1.91 Ang.
PLAT430_ALERT_2_A Short Inter D...A Contact O182 .. O231 .. 2.02 Ang.
PLAT430_ALERT_2_A Short Inter D...A Contact O182 .. O241 .. 2.47 Ang.
PLAT430_ALERT_2_A Short Inter D...A Contact O221 .. O231 .. 1.50 Ang.
PLAT430_ALERT_2_A Short Inter D...A Contact O221 .. O241 .. 1.59 Ang.
PLAT731_ALERT_1_A Bond Calc 0.84(5), Rep 0.842(5) ...... 9.90 su-Ra
O201 -H201 1.555 1.555
PLAT731_ALERT_1_A Bond Calc 0.84(6), Rep 0.843(5) ...... 9.90 su-Ra
O201 -H202 1.555 1.555
PLAT731_ALERT_1_A Bond Calc 0.83(5), Rep 0.839(5) ...... 9.90 su-Ra
O211 -H212 1.555 1.555
Alert level B
PLAT430_ALERT_2_B Short Inter D...A Contact O41 .. N171 .. 2.86 Ang.
PLAT430_ALERT_2_B Short Inter D...A Contact O51 .. O241 .. 2.67 Ang.
PLAT430_ALERT_2_B Short Inter D...A Contact N181 .. O231 .. 2.66 Ang.
PLAT432_ALERT_2_B Short Inter X...Y Contact Cl51 .. O241 .. 2.83 Ang.
PLAT432_ALERT_2_B Short Inter X...Y Contact C4 .. O36 .. 2.90 Ang.
PLAT732_ALERT_1_B Angle Calc 106(5), Rep 106.2(9) ...... 5.56 su-Ra
H201 -O201 -H202 1.555 1.555 1.555
PLAT732_ALERT_1_B Angle Calc 107(6), Rep 107.1(9) ...... 6.67 su-Ra
H211 -O211 -H212 1.555 1.555 1.555
Alert level C
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.16
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... >O221
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... <O231
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... <O241
PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang .. 7
PLAT420_ALERT_2_C D-H Without Acceptor N3 - H3A ... ?
PLAT420_ALERT_2_C D-H Without Acceptor N51 - H51A ... ?
PLAT420_ALERT_2_C D-H Without Acceptor N53 - H53A ... ?
PLAT420_ALERT_2_C D-H Without Acceptor N56 - H56A ... ?
PLAT430_ALERT_2_C Short Inter D...A Contact O112 .. O71 .. 2.89 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact O22 .. C76 .. 3.00 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact O23 .. C27 .. 2.92 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact O41 .. C59 .. 3.01 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact O142 .. C131 .. 2.99 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C62 .. O58 .. 2.97 Ang.
PLAT041_ALERT_1_C Calc. and Reported SumFormula Strings Differ ?
PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ?
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ?
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N101
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N111
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N121
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N131
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N151
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N181
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl11
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl31
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl51
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl61
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl76
PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of Cl71
Alert level G
FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and the formula from the _atom_site* data.
Atom count from _chemical_formula_sum:C81 H97 Cl8 Mn4 N45 O53
Atom count from the _atom_site data: C81 H95 Cl8 Mn4 N45 O53
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional?
From the CIF: _cell_formula_units_Z 4
From the CIF: _chemical_formula_sum C81 H97 Cl8 Mn4 N45 O53
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 324.00 324.00 0.00
H 388.00 380.00 8.00
Cl 32.00 32.00 0.00
Mn 16.00 16.00 0.00
N 180.00 180.00 0.00
O 212.00 212.00 0.00
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large. 41.76
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3084
PLAT302_ALERT_4_G Note: Anion/Solvent Disorder ................... 20.00 Perc.
8 ALERT level A = In general: serious problem
7 ALERT level B = Potentially serious problem
30 ALERT level C = Check and explain
6 ALERT level G = General alerts; check
10 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
26 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
13 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Publication of your CIF in IUCr journals
A basic structural check has been run on your CIF.
These basic checks will be run on all CIFs submitted for publication in
IUCr journals (Acta Crystallographica, Journal of Applied Crystallography,
Journal of Synchrotron Radiation); however, if you intend to submit to Acta
Crystallographica Section C or E, you should make sure that
full publication
checks are run on the final version of your CIF prior to submission.
Publication of your CIF in other journals
Please refer to the Notes for Authors of the relevant journal for any special instructions relating to CIF submission.
PLATON version of 13/08/2009; check.def file version of 12/08/2009
Datablock s93 - ellipsoid plot |
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